sivico26

Simón Villanueva Corrales's starred repositories

A command-line benchmarking tool

Language:RustApache-2.021696 93 249

The Fast Cross-Platform Package Manager

Language:C++BSD-3-Clause6794 47 1734

pdb++, a drop-in replacement for pdb (the Python debugger)

Language:PythonBSD-3-Clause1298 18 206

A list of interesting genome browser or genome-browser-like implementations

Language:TypeScript839 28 9

The next version of bwa-mem

Language:C++NOASSERTION716 36 213

Inference of ploidy and heterozygosity structure using whole genome sequencing data

Language:CApache-2.0226 10 149

Language:C++NOASSERTION221 16 364

Identification of differential RNA modifications from nanopore direct RNA sequencing

Language:PythonMIT134 9 145

Long-read mock community experiments

Language:HTML103 9 9

shell tools for processing phylogenetic trees

Language:CNOASSERTION101 6 30

An accurate and ultra-fast hybrid genome assembler

Language:PerlAGPL-3.084 7 78

General programming utilities from Pew Research Center

Language:PythonGPL-2.069 60

Graph-based mapping of long sequences, noisy or HiFi.

Language:PerlBSD-3-Clause-Clear54 9 1

NanoDJ: A Dockerized Jupyter Notebook for Interactive Oxford Nanopore MinION Sequence Manipulation and Genome Assembly

Language:Jupyter NotebookGPL-3.049 5 3

This repository is deprecated, please use the link to the right.

Language:PythonMIT23 5 12

Ultrafast mRNA Quantification software for RNA-Seq

Language:HTMLGPL-3.08 4 1