sitanshubhunia's repositories
adme-pred-py
Python implementation of common ADME properties.
AI4Green
ELN
aizynthfinder
A tool for retrosynthetic planning
biosimspace
An interoperable Python framework for biomolecular simulation.
chemprop
Message Passing Neural Networks for Molecule Property Prediction
chemprop-Dkr
Fast and scalable uncertainty quantification for neural molecular property prediction, accelerated optimization, and guided virtual screening.
DECIMER-Java
Deep Learning for Chemical Image Recognition (DECIMER)
docker-postgres-rdkit
The PostgreSQL image, just extended with the RDKit cartridge
find_sds
Find safety data sheet (SDS) for chemicals using their CAS numbers
matcher
Matcher is a tool for understanding how chemical structure optimization problems have been solved. Matcher enables deep control over searching structure/activity relationships (SAR) derived from large datasets, and takes the form of an accessible web application with simple deployment. Matcher is built around the mmpdb platform.
rxnmapper
RXNMapper: Unsupervised attention-guided atom-mapping. Code complementing our Science Advances publication on "Extraction of organic chemistry grammar from unsupervised learning of chemical reactions" (https://advances.sciencemag.org/content/7/15/eabe4166).
sitanshubhunia
Config files for my GitHub profile.
what_do_mol_prop_look_like
What do molecular properties look like?
Heart-Failure-Prediction-and-Deployment-with-Flask-and-Heroku
Cardiovascular diseases are the number 1 cause of death globally
introtodeeplearning
Lab Materials for MIT 6.S191: Introduction to Deep Learning
iSIM
Module containing scripts to perform multiple comparison simultaneously and getting the exact same value as the average pairwise comparisons of molecules represented by binary fingerprints or real number descriptors.
LocalRetro
Retrosynthesis prediction for organic molecules with LocalRetro
molecular_fingerprint
Molecular Fingerprint
molssi-hub
MolSSI Container Hub for Computational Molecular Science
opsin
Open Parser for Systematic IUPAC Nomenclature. Chemical name to structure conversion
pikachu
Python-based Informatics Kit for Analysing Chemical Units
rdkit-build-helpers
Recipes to build RDKit artifacts (e.g., Java and C# libraries, NuGet packages) and some usage examples
RdkitTools
This GitHub repository contains tools and scripts for calculating molecular properties using RDKit, a powerful open-source library for computational chemistry. These tools can be used for in silico drug design, virtual screening, and other applications in medicinal chemistry.
sire
Sire Molecular Simulations Framework
Smiles-TO-iUpac-Translator
Transformer based SMILES to IUPAC Translator