sisimimi2 / dssat-docker

Build and run DSSAT in a Docker container.

DSSAT for Docker

Building

Default

1. Run docker build . -t dssat-csm

From a different version or tag:

1. See the available tags (you can use any git commit, tag, etc for this)
2. Pass the desired tag as DSSAT_GIT_TAG: docker build . -t dssat-csm --build-arg DSSAT_GIT_TAG=v4.8.0.27 (replace the tag with the desired one)

Note: you can combine both DSSAT_GIT_TAG and DSSAT_GIT_REPO arguments

From a different GIT repository:

1. Pass the desired repo URL as DSSAT_GIT_REPO: docker build . -t dssat-csm --build-arg DSSAT_GIT_REPO=https://github.com/NathanPB/dssat-csm-os.git (replace the URL with the desired one)

Note: you can combine both DSSAT_GIT_TAG and DSSAT_GIT_REPO arguments

From your local sources

Due Docker security measures you need to paste your source files into the ./src directory, and then use the local.Dockerfile file to build from:

1. Run docker build . -f local.Dockerfile -t dssat

Running

If you followed the above steps your image should be tagged as dssat-csm (feel free to change this tag label).

1. Change to the directory with your experimental files (XFile, etc.)
2. Run the container: docker run --rm -v ${PWD}:/data -w /data dssat-csm A <xfile name> or docker run --rm -v ${PWD}:/data -w /data dssat-csm B <batch file name>