SIPLab's repositories
generative-causal-explanations
Code for "Generative causal explanations of black-box classifiers"
hiwa-matlab
Hierarchical Wasserstein Alignment
pairsearch
Project code for "Active Embedding Search via Noisy Paired Comparisons" (ICML 2019)
Manifold_Autoencoder
Code for "Representing Closed Transformation Paths in Encoded Network Latent Space"
Spatial-Filtering-for-Sparse-Signals
Code to implement the algorithm described in the paper "Spectral super-resolution of hyperspectral imagery using re-weighted L1 spatial filtering" in IEEE GRSL (2014) by Charles and Rozell. Code by A. Charles.
DIC-Cell-Simulator
Code to implement the simulation framework described in the manuscript "Cell Membrane Tracking in Living Brain Tissue using Differential Interference Contrast Microscopy" by Lee, Kolb, Forest and Rozell. Code by J. Lee.
localized-sparse-coding
Sparse dictionary learning with biologically plausible compression matrices
probabilistic-decomposed-linear-dynamical-systems
Probabilistic Decomposed Linear Dynamical Systems
Tracking-sparse-signals-via-L1-filtering
Code to produce the results in the paper "Discrete and Continuous-time Soft-Thresholding with Dynamic Inputs" by Balavoine, Rozell and Romberg. Code by A. Balavoine.
UOT-regularization
Code for "Unbalanced Optimal Transport Regularization for Imaging Problems" by Lee, Bertrand, and Rozell.
Convergence-speed-of-a-dynamical-system-performing-sparse-coding
Code to produce the results in the paper "Convergence Speed of a Dynamical System for Sparse Recovery" in IEEE Trans. Signal Processing (2013) by Balavoine, Rozell and Romberg. Code by A. Balavoine.
Decomposed-Linear-Dynamical-Systems
This is code for the paper "Decomposed Linear Dynamical Systems (dLDS) for learning the latent components of neural dynamics" (Mudrik, 2022)
Dynamic-filtering-for-sparse-signals
Code to implement the algorithm described in the paper "Dynamic filtering of time-varying sparse signals via L1 minimization"
emd-df
MATLAB implementation of the Earth Mover's Distance Dynamic Filtering (EMD-DF) algorithm from Bertrand et al., 2018
Inhibitory-interneuron-models-via-convex-optimization
Code to produce the results in the paper "Modeling biologically realistic inhibitory interneurons in sensory coding models" in PLoS Computational Biology (2015) by Zhu and Rozell. Code by M. Zhu.
Sparse-Coding-Dictionary-Learning-Library
Code to implement the sparse coding dictionary learning algorithm described in "Emergence of simple-cell receptive field properties by learning a sparse code for natural images" in Nature (1996) by Olshausen and Field.
uot-irst
Implementation of unbalanced optimal transport algorithms for infrared search and track from Bertrand et al., 2020
wslfp
Lightweight package for computing the Weighted Sum of synaptic currents LFP proxy from Mazzoni, Lindén et al., 2015