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Sina Rüeger (sinarueeger)

sinarueeger

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Location:Finland

Home Page:https://sinarueeger.github.io/

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Sina Rüeger's starred repositories

mapnificent

Mapnificent shows you areas you can reach with public transport in a given time.

Language:JavaScriptLicense:NOASSERTIONStargazers:375Issues:23Issues:28

glow

An open-source toolkit for large-scale genomic analysis

Language:ScalaLicense:Apache-2.0Stargazers:262Issues:19Issues:158

deep-learning-genomics-primer

Contains files for the deep learning in genomics primer.

Language:Jupyter NotebookStargazers:258Issues:8Issues:4

renku

Renku provides a platform and tools for reproducible and collaborative data analysis.

Language:ScalaLicense:Apache-2.0Stargazers:218Issues:28Issues:629

systemsgenetics

Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool

Language:JavaLicense:GPL-3.0Stargazers:169Issues:47Issues:93

apreshill

Personal website of Alison Presmanes Hill

Language:SCSSStargazers:158Issues:7Issues:23

riskmetric

Metrics to evaluate the risk of R packages

Language:RLicense:NOASSERTIONStargazers:156Issues:15Issues:222

coloc

Repo for the R package coloc

Language:RStargazers:139Issues:4Issues:146

gistr

Interact with GitHub gists from R

Language:RLicense:NOASSERTIONStargazers:103Issues:11Issues:77

locuscomparer

LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.

Language:RStargazers:95Issues:6Issues:28

gwasrapidd

gwasrapidd: an R package to query, download and wrangle GWAS Catalog data

Language:RLicense:NOASSERTIONStargazers:88Issues:4Issues:44

tidy-dev-day

Tidyverse developer day

Language:RStargazers:66Issues:18Issues:39

mixer

Causal Mixture Model for GWAS summary statistics

Language:CLicense:GPL-3.0Stargazers:57Issues:23Issues:88

LDlinkR

LDlinkR

Language:RStargazers:53Issues:8Issues:32

caviar

Language:C++Stargazers:50Issues:2Issues:31

hyprcoloc

Hypothesis Prioritisation in multi-trait Colocalization

Language:RLicense:GPL-3.0Stargazers:44Issues:3Issues:31

tomahawk

Fast calculations of linkage-disequilibrium in large-scale human cohorts

Language:C++License:MITStargazers:41Issues:5Issues:16

PyHLA

Python for HLA analysis: summary, association analysis, zygosity test and interaction test

Language:PythonStargazers:31Issues:7Issues:10

genetics-gold-standards

GWAS gold standards repository

Language:PythonLicense:Apache-2.0Stargazers:28Issues:13Issues:0

sanzo

R Color Palettes Based on the Works of Sanzo Wada – A CRAN Package

Language:HTMLStargazers:26Issues:2Issues:0

TWMR

Language:RStargazers:19Issues:0Issues:6

chipimputation

Genotype Imputation Pipeline for H3Africa

Language:NextflowLicense:MITStargazers:19Issues:11Issues:15

genetics-docs

License:Apache-2.0Stargazers:11Issues:17Issues:0

LHC-MR

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revTWMR

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genobias

Language:RStargazers:3Issues:4Issues:0

PCA

Principal component analysis

Language:JavaStargazers:3Issues:1Issues:0

HBV

Genome-to-Genome Study of HBV-infected individuals - EPFL Fellay lab

Language:Jupyter NotebookStargazers:3Issues:2Issues:1

BloodAtlas

Language:RStargazers:2Issues:1Issues:0

slack-invite-automation

A tiny web application to invite a user into your slack team.

Language:HTMLLicense:MITStargazers:1Issues:3Issues:0