Simone Procaccia's repositories
colorectal_dml
Network-based analysis of TCGA Colorectal cancer RNA-Seq data using CorEx
deep-DNArt
repository of the code produced during the Copenhagen Bioinformatics Hackaton
Clocalizer
a convolutional neural network for subcellular localization
nanoplotter
Plotting functions of Oxford Nanopore sequencing data
cellatac
Sanger Cellular Genetics single-cell ATAC-seq pipeline.
cisTopic
cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data
data_structure
just a bunch of scripts from my lectures on data structure
homework_2
Homeworks 2 from Hackerrank
psc2
Principes of Computer Sciece 2 as part of BioInformatics at Sapienza
scenicplus
SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data.