Silas Tittes's repositories
calibrator
A simple method for species delimitation
evoRtorials
Evolutionary Biology (EBIO 3080) lecture slides and tools to help students with R.
Genomics-align3r
Example script for aligning Illumina reads to a reference with bwa and calling snps and indels with samtools
Genomics2015
Like Christmas elves, but for bioinformatics
housekeeping
various bioinformatics scripts for converting file types and other mundane tasks to complete on the terminal
ML_popgen_container
Container for Machine Learning and Population Genetics
msr
Process MS results in R, in a tidy way
OU-sim-app
A shiny app for demonstrating 2 regime OU process
soapSearch
A simple method for searching through a suite of parameters for de novo assembly using soap denovo
styles
Official repository for Citation Style Language (CSL) citation styles.
tester
experimenting with more advanced git-tery
tolerance_curves
Data, analyses, and code associated with "Grow where you thrive, or where only you can survive" (Tittes et al.)