LMIB's repositories
pyxelperfect
Collection of image-processing tools for bioinformatic applications
sifrimlab.github.io
Source code for LMIB website
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ST-nextflow-pipeline
This repository contains the entire codebase necessary to pilot STAPLE, an automated end-to-end pipeline that processes Spatial Transcriptomics datasets.
Language:Jupyter NotebookGPL-3.0000
Probedesign
MERFISH Probe design test
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enteric_neuron_tools
This repository contains both a script and a gui to process .czi images and count and segment enteric neurons that are visualized on one of the channels.
Language:PythonGPL-3.0000
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