skull-stripper
Segmentation of mouse brain fMRI
Depedencies
- Python 3.6.8
- Torch 1.3.1
- Torchvision 0.4.2
- Tensorboard 1.14.0
- TensorboardX 1.4
- Numpy 1.17.2
- Matplotlib 3.1.1
- Pillow 6.2.1
- scikit-image 0.16.2
- scikit-learn 0.21.3
Citation
@inproceedings{pontes2021deep,
title={A Deep Learning-Based Tool for Automatic Brain Extraction from Functional Magnetic Resonance Images of Rodents},
author={Pontes-Filho, Sidney and Dahl, Annelene Gulden and Nichele, Stefano and Mello, Gustavo BM},
booktitle={Proceedings of SAI Intelligent Systems Conference},
pages={549--558},
year={2021},
organization={Springer}
}