siboles

pyCellAnalyst

pyCellAnalyst is a Python module for 3D reconstruction and deformation analysis of biological objects.

pyFEBio

A Python API for FEBio

lsmgridtrack

A Python module to enable deformable image registration of 3D images with photobleached grids under mechanical loading.

bioMultiScale

Automates the multiscale finite element modelling process for tissue to cellular scales. The original implementation was aimed at usage in articular cartilage, but may be extended to other applications.

PoroMech

A Python module for processing and visualizing poroelastic/viscoelastic material testing data.

AttentionSiteDTI

This is The repository for Paper "AttentionSiteDTI: Attention Based Model for Predicting Drug-Target Interaction Using Graph Representation of Ligands and 3D Structure of Protein Binding Sites"

carlworld-beamer-slide-theme

Carl Compliant Beamer slide theme

conda-publish-action

Github Action to deploy conda package to Anaconda repository

conda-recipes

dotfiles

My dotfiles

github-move

hexapy

gridap_tutorials

Start solving PDEs in Julia with Gridap.jl

kickstart.nvim

A launch point for your personal nvim configuration

my_neovim

My neovim configs.

pcm_segmenter

2-D segmentation and analysis of the pericellular matrix surrounding chondrocytes

pyGenLesion

Generate tetrahedral meshes of a simplified medial knee compartment with an arbitrary number of cartilage lesions with arbitrary size and depth.

resonant_lsm

rtd-tutorial

tetmesh

Wraps a C++ binary for creating high-quality tetrahedral meshes from polygon surfaces using the Computational Geometry Algorithms Library (CGAL).