Mao Jiashun's repositories
MolReactGen
Auto-regressive causal language model for molecule (SMILES) and reaction template (SMARTS) generation based on the Hugging Face implementation of OpenAI's GPT-2 transformer decoder model
acegen-open
Language models for drug discovery using torchrl
act-plus-plus
Imitation Learning algorithms with Co-traing for Mobile ALOHA: ACT, Diffusion Policy, VINN
AI2BMD
AI-powered ab initio biomolecular dynamics simulation
AlphaFold3
Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
awesome-AI4ProteinConformation-MD
List of protein conformations and molecular dynamics using generative artificial intelligence and deep learning
awesome-BioMolFold
RNA, mRNA, DNA, Peptide, Protein, Antibody and Complex | Folding
CGIP
A simple and effective Contrastive Graph-Image Pre-training framework for molecular representation learning
Chat-with-Document-s-using-ChatGPT-API-and-Text-Embedding
A Chatbot of Data Science Expert- Chat with Document(s) using ChatGPT API and Text Embedding
cvxportfolio
Portfolio optimization and back-testing.
diffusion-nbs
Getting started with diffusion
evo
DNA foundation modeling from molecular to genome scale
frp
A fast reverse proxy to help you expose a local server behind a NAT or firewall to the internet.
GEAM
Official code repository for the paper Drug Discovery with Dynamic Goal-aware Fragments (ICML 2024)
GeneTrajectory
R implementation of GeneTrajectory
GeneTrajectory-python
Python implementation of Gene Trajectory
GPT-ST
[NeurIPS'2023] "GPT-ST: Generative Pre-Training of Spatio-Temporal Graph Neural Networks"
machine-learning
Learn AI together, for free. AI learning and teaching resources for everyone.
OpenSource-LLMs-better-than-OpenAI
Listing all reported open-source LLMs achieving a higher score than proprietary, paying OpenAI models (ChatGPT, GPT-4).
PCMol
Multi-target de novo molecular generator conditioned on AlphaFold latent embeddings
PocketFlow
an autoregressive flow model incorporated with chemical acknowledge for generating drug-like molecules inside protein pockets
PromptSMILES
Scaffold decoration and fragment linking with chemical language models and RL
scNODE
scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction
VisionProTeleop
VisionOS App + Python Library to stream head / wrist / finger tracking data from Vision Pro to any robots.