shiquan

shiquan's repositories

a lightweight bam file depth statistical tool

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A collection of tools to process single-cell omics datasets.

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A fast and flexible program to annotate/interpret genetic variants in VCF/BCF file

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Perl extension to access pre-indexed FASTA

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tsv2excel is a lightwight tool to convert tsv (plain or gziped) files to a excel file.

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lightweight tools to handle three columns bed files

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Practical demo datasets for undergraduate students.

document files

Codes for manuscript

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This package contains deep learning models and related scripts for RoseTTAFold

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source codes and pipeline for scTRIBE project

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The only purpose of this project is training high school students in the summer camp activities

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Spatial dissimilarity analysis in single cells

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document for Yano

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