shenweima's repositories
wheat-methylation
Analysis wheat methylation data using BS-Seeker2 and CGmapTools
docker-galaxy-genome-annotation
:whale: Galaxy Docker Image with Tools for Genome Annotation
draw_genes
A flexible python program for generating figures from regions of the genome.
filter-BlastXML-result
filter BlastXML result
funannotate
Eukaryotic Genome Annotation Pipeline
Functional_haplotype_GWAS
Selecting closely-linked SNPs based on local epistatic effects for haplotype construction improves power of association mapping
gameofthrones
Colour Palette for R inspired in the TV show Game of Thrones
Plasticity
Rice flowering time plasticity
PopLDdecay
PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files
python-highcharts
A simple translation layer between Python and Javascript for Highcharts projects (highcharts, highmaps, and highstocks).
python_project
the test project
smoove
structural variant calling and genotyping with existing tools, but, smoothly.
strawberry
A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)
WheatCo-expression
build co-expression network for wheat
WheatGeneAnnotation
Aim to improve wheat gene structure annotation using multiple transcriptome data