shendurelab / MIPGEN

One stop MIP design and analysis

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

The final step of the analysis did not respond, no error message was displayed, and only an empty file was generated.

zpc975571872 opened this issue · comments

Dear Even or his associate,

I hope this letter finds you well. I have a question that I would like to ask regarding an
IMG_20230402_160305
issue I encountered during my analysis process. At the final step of my analysis, which involves the read and fold procedure, I encountered a problem where the
Uploading IMG_20230402_160305.jpg…
process seemed to get stuck. There were no error messages, but the generated file was empty and there were no results. Have you ever encountered a similar issue? Could you provide me with some guidance or suggestions?

I apologize for bothering you on the weekend and thank you in advance for any help you can provide.

Best regards,

Pengcheng Zhang

Hi Pengcheng,

I would say for new users, a newer MIP analysis pipeline would be the best place to start: https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1007956

The designing scripts should be robust, but the analysis steps were fairly lightweight and not the easiest to work with.

Thanks,augustboyle!
Thank you for your reply, the problem has been solved is python3 issue, not very compatible with scripts, now the problem is solved.
Thank you for your hard work