Shalvi Chirmade's repositories
methylation-viz
A script to run pb-cpg-tools command on every line in a .bed file and provide methylation visualization using karyoploteR.
BRCA1-Deficient-Mouse-Tumors-Gene-Expression-Analysis
Gene expression study on a dataset procured from BRCA1-deficient mouse mammary tumors.
Language:R000
Canis-Geographical-Diversification
BINF6210 - Bioinformatics Software Tools - University of Guelph - Assignment 2 - How Does Geography Relate to Diversification of the Genus Canis?
Language:R000
Felidae-Geographic-Diversity
Understanding the geographical diversity of the family, Felidae.
Language:R000
gwas-svatalog-docs
Documentation for the visualization tool GWAS SVatalog.
Language:Python000
Microbiome-Analysis-for-Diet-and-Mental-Health
Microbiome analysis of ten patient samples for the identification of diet-derived metabolites and their effects on mental health.
Language:R000
Promoter-Recognition-Script
Assignment 3 - BINF 6410
Language:Python000
Restriction-Enzyme-Sites
Program that reads in a FASTA file and a restriction enzyme file, analyzes the cut sites and outputs the results.
Language:Python000