Shah Lab (shahlab)

Shah Lab

shahlab

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Home Page:theshahlab.org

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Shah Lab's repositories

teaching

Courses taught by Premal Shah @Rutgers University

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ProteinDecayNoise-paper

This repo is related to the data that went into the paper associated with the thesis "Evaluating noise in protein decay"

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ltee_massspec

Code for our paper studying metabolic effects of expression changes in the LTEE

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LTEE_gene_expression_2

A repository for the second version of our LTEE gene expression paper

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nnPUlearning

Non-negative Positive-Unlabeled (nnPU) and unbiased Positive-Unlabeled (uPU) learning reproductive code on MNIST and CIFAR10

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start-site-predictor

Prediction of translation start sites using Machine Learning

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Intragenomic_variation_mutation_bias

A repository presenting the results from our analysis on the effects of intragenomic mutation bias variation within budding yeasts.

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RiboRet

An R package to keep our code for analyzing RiboRet data

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XACT-seq

Code for processing XACT-seq data

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contingency_entrenchment

Scripts for homology modeling and FoldX simulations

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SMoPT

Stochastic Model of Protein Translation

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