sgibb

MALDIquant

Quantitative Analysis of Mass Spectrometry Data

MALDIquantExamples

Some examples to analyze mass spectrometry data using MALDIquant

readBrukerFlexData

Reads data files acquired by MALDI-TOF MS on Bruker Daltonics machines of the *flex series

cleaver

Cleavage of polypeptide sequences

MALDIquantForeign

Import/Export routines for MALDIquant

readMzXmlData

Reads mass spectrometry data in mzXML format

MALDIquantTools

Additional tools for MALDIquant

bootstrap

Simple Bootstrapping for Hierarchical Clustering

dotfiles

My dotfiles managed with git and GNU stow

topdownr

R-package for the analysis of Thermo Orbitrap Fusion Top-Down Proteomic Data.

BiocFileCache

Manage Files Across Sessions

cli

Tools for making beautiful & useful command line interfaces

hypercapnia

Calculate Carbon Dioxide Equivalent of Inhaled Anaesthetics.

icmsofa

SOFA score calculation from ICM output

impact

ML has an impact on the climate. But not all models are born equal. Compute your model's emissions with our calculator and add the results to your paper with our generated latex template

metabolomics2023

Contribution to the Metabolomics 2023 conference of the Metabolomics Society

meth-modifications

XML-based Method Modifications

mzR

This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data)

pRoloc

A unifying bioinformatics framework for organelle proteomics

ProtGenerics

S4 generic functions for Bioconductor proteomics infrastructure

rmapi

Go app that allows you to access your reMarkable tablet files through the Cloud API

sgibb.github.io

personal github page

Spectra

Low level infrastructure to handle MS spectra

strimmerlab.github.io

strimmerlab website

survivalmodels

Implementations of survival models in R

tab

Create Summary Tables for Statistical Reports

tableone

R package to create "Table 1", description of baseline characteristics

topdownrdata

Example data for the `topdown` R package

vim-devtools-plugin

Extension for vim-r-plugin to support the devtools package

wakwin-mooc