sequana's repositories
demultiplex
Sequana demultiplexing pipeline
webapp_samplesheet
test st
sequana_pipetools
A set of tools to help building or using sequana pipelines
bioconvert
convert files from one format to another using bioconvert
downsampling
down sample NGS data
GNFish
Suite of Python programs for Gene extraction and Phylogentic Inference
GPL-3.0000
quality_control
A quality control pipeline for illumina data set. This pipeline removes contaminants (e.g. Phix), performs fastqc, adapter cleaning and trimming and checks for contaminants
Language:PythonBSD-3-Clause000
ribofinder
Workflow to find ribosomal feature in set of FastQ files
sequana-wrappers
The Sequana Wrapper Repository is a collection of reusable wrappers used in Sequana Pipelines.
sequana.github.io
resource for the website
Language:JavaScript000
sequana_pipeline_template
a cookiecutter sequana pipeline template
Language:PythonBSD-3-Clause000