A toolbox for mapping (habitat, bathymetry, and water quality) and detection change for coral reef health assessment and monitoring
The Sen2Coral-box include two third-party libraries which have been forked and modified: 'sambuca' and 'sambuca_core'. The licenses of these projects are available in their respective folders.
Download and install the required build tools * Install J2SE 1.8 JDK and set JAVA_HOME accordingly. * Install Maven and set MAVEN_HOME accordingly. * Install git
Add $JAVA_HOME/bin, $MAVEN_HOME/bin to your PATH.
Clone the Sen2Coral source code and related repositories into a directory referred to as ${snap} from here on
cd ${snap}
git clone https://github.com/senbox-org/sen2coral.git
git clone https://github.com/senbox-org/snap-desktop.git
git clone https://github.com/senbox-org/snap-engine.git
Build SNAP-Engine:
cd ${snap}/snap-engine
mvn install
Build SNAP-Desktop:
cd ${snap}/snap-desktop
mvn install
Build Sen2Coral Toolbox:
cd ${snap}/sen2coral
mvn install
If unit tests are failing, you can use the following to skip the tests
mvn clean
mvn install -Dmaven.test.skip=true
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Create an empty project with the ${snap} directory as project directory
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Import the pom.xml files of snap-engine, snap-desktop and sen2cor as modules. Ensure not to enable the option Create module groups for multi-module Maven projects. Everything can be default values.
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Set the used SDK for the main project. A JDK 1.8 or later is needed.
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Use the following configuration to run SNAP in the IDE:
Main class: org.esa.snap.nbexec.Launcher VM parameters: -Dsun.awt.nopixfmt=true -Dsun.java2d.noddraw=true -Dsun.java2d.dpiaware=false All VM parameters are optional Program arguments: --userdir "${snap}/sen2coral/target/userdir" --clusters "${snap}/sen2coral/sen2coral-kit/target/netbeans_clusters/sen2coral" --patches "${snap}/snap-engine/$/target/classes;${snap}/sen2coral/$/target/classes" Working directory: ${snap}/snap-desktop/snap-application/target/snap/ Use classpath of module: snap-main
Enjoy!