semiller10

semiller10.github.io

postnovo

Post-processing peptide de novo sequences to improve their accuracy

anvio

An analysis and visualization platform for 'omics data

animated-physics

Playing around with matplotlib animation with inspiration from Walter Lewin's physics lectures

protein-express

Compare metaproteomic data to metagenomic bins to understand patterns of protein expression across taxonomic groups and environments

reassembly

Reassemble similar metagenomic bins from multiple samples

bins-to-reads

Recover all reads associated with bins in Anvi'o database

uid-to-hierarchy

Convert DIAMOND taxid output to table of taxon membership for import into Anvi'o

metagenome_to_protein_db