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seekr2

Simulation-Enabled Estimation of Kinetic Rates - Version 2

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openmm_ramd

Allows one to run RAMD simulations in OpenMM

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qmrebind

Quantum Mechanical - Molecular Mechanical Re-parameterization of the Receptor-Ligand Binding site implemented in Simulation Enabled Estimation of Kinetic Rates (SEEKR)

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seekr2_openmm_plugin

The SEEKR2 OpenMM Plugin

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seekr2_openmm_plugin-feedstock

A conda-smithy repository for seekr2_openmm_plugin.

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seekr2_systems

A set of example systems that can be used for SEEKR2 calculations.

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