scverse / prelude-runner

Jupyter notebook runner that executes preludes before each cell

prelude-runner

1. Create a prelude_cell.py and prelude_notebook.py in a directory.
2. Running your notebooks with the prelude runner to execute the prelude code before each notebook / cell.

echo 'import random; random.seed(0)' >./config/prelude_cell.py
echo '' >./config/prelude_notebook.py
prelude-runner --preludes=./config ./notebooks