scalefreegan

Aaron Brooks's repositories

egrin2-tools

EGRIN2.0 tool chain

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InteractiveNetwork

Project with Wei-ju Wu for Pacific Science Center

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scramble

Scripts associated with the paper, "Transcriptional neighborhoods regulate transcript isoform expression"

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arangodb-kg-etl-example

Example of robust ETL for knowledge graph construction with ArangoDB

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beer-graph-learning

Unlocking the ideal beer recipe

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clustQTL

Detecting QTLs with clustering

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Corems

Corem generation and analysis for EGRIN2

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NetworkGame

game for NIH science fair

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Presentations

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Dissertation

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Fellowships

Repository for ongoing and submitted fellowships

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ipython-notebooks

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Papers

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personal_website

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Porechop

adapter trimmer for Oxford Nanopore reads

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Proposals

Repository for submitted proposals

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pyGenomeTracks

python module to plot beautiful and highly customizable genome browser tracks

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R-tools

Handy stuff

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rARACNE

Tools for running ARACNE. Interface to R.

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Rcmonkey2

R package containing scripts and wrappers to interface with SQLite db returned by cMonkey2 for analysis in R.

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scalefreegan.github.io

HTML hosting for ongoing project

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steinmetz-lab

General repository for Steinmetz lab related work and projects

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Strang_LinearAlgebra

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Teaching

Teaching related materials

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