Produced and made publicly available by Salim Arslan (contact: name.surname@imperial.ac.uk)
Redistribution and use in source codes, with or without modification, are permitted provided that the following conditions are met:
- We kindly request that use of this software be cited in publications as:
S. Arslan, D. Rueckert, "Multi-level parcellation of the cerebral
cortex using resting-state fMRI," Proceedings of MICCAI: International
Conference on Medical Image Computing and Computer Assisted
Intervention. Vol. 9351 of LNCS. Springer, pp. 47-55.
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#Notes Developed in MATLAB R2014a on Ubuntu 14.04
Prerequisites:
(MUST) iso2mesh: a Matlab-based mesh generator http://iso2mesh.sourceforge.net/
(COND) Connectome Workbench http://www.humanconnectome.org/software/get-connectome-workbench.html
Dataset:
This version has been tested on the Human Connectome Project (HCP) datasets. The code has a deep dependency with the HCP data structures. The data can be downloaded from https://db.humanconnectome.org. Make sure that you extract all the files into the same folder or you may need to modify the main script according to your own directory structure.
#Tutorial Simply run RUN_supervertex_clustering after setting the Path and updating the directories from which the data is read.