Sara Patterson's repositories
SBFSEM-tools
Matlab toolbox for connectomics analysis and rendering
foveal-spectral-tuning
Code related to a paper on foveal spectral tuning
ao-seg
Neural nets for segmenting fluorescent neurons frimaged with adaptive optics
appbox
A MATLAB toolbox for building Apps
covid19-data-import
Code for parsing COVID-19 datasets along with generic instruction on data importing in MATLAB
described-data
Classes for adding metadata to MATLAB numeric data types
h5tools-matlab
A toolbox of high-level functions for working with HDF5 files in MATLAB
RoiViewer
Standalone region of interest response viewer
sara-aodata-package
Personal package for AOData
DualAO-package
Protocols for flood and SLO arms
facile-tools
Tools for segmentation and analysis of GCaMP6-expressing RGCs imaged in vivo with adaptive optics
faoslo-online
Online analysis for calcium imaging with fluorescence adaptive optics scanning laser ophthalmoscopes
igor-tools
useful routines for publication-quality figures in igor pro
imagej-tools
Useful routines for ImageJ
keymaps
Keymaps for my mechanical keyboards
NonCardinalRGCs
Code related to non-cardinal RGC paper
patterson-package
Retinal physiology experiment protocols 2.0
patterson-package-v2
Electrophysiology protocols
preprocessing-tools
Workflow for preprocessing functional imaging data
qmk_firmware
Open-source keyboard firmware for Atmel AVR and Arm USB families
RabbitGammaCell
Code and data used in Bordt et al (2019) Synaptic inputs and connectivity of a sparsely branched ganglion cell in rabbit retina
SConeEdgeDetection
Data and code for Patterson et al (2019) Scientific Reports
SmoothMonostratifiedRGC
Code for replicating the figures in Patterson, Girresch et al (2023)
symphony-matlab
Symphony Data Acquisition System
SynapticInputsToOnParasolCells
Code for Bordt, Patterson et al (in press) J Comp Neurol