Ankur Sinha's repositories
planet-neuroscientists
This repository is no longer in use. Please see the current instance of planet neuroscientists in the URL
SinhaEtAl2021
Simulation source code used in SinhaEtAl2021
2021-06-28-Git-tutorial
Test repository for the Software WG Git tutorial at CNS*2021!
AllenInstituteNeuroML
Example files to test interaction between models developed at the Allen Brain Institute and NeuroML
docker-redmine-osb
Docker Image for Redmine
docs
Repository for all documentation written about tools hosted at github.com/containers
genesis-2.4
Repository for continued development of GENESIS 2.4 neural simulator
GoC_Network_Sim_BehInputs
Biophysical-detailed models of electrically-coupled cerebellar Golgi cell circuits, used in the paper "Multidimensional population activity in an electrically coupled inhibitory circuit in the cerebellar cortex" by Gurnani and Silver in Neuron, 2021.
jLEMS
Java Interpreter for the Low Entropy Model Specification language
lazy_ops
Lazy transposing and slicing of h5py and Zarr Datasets
lazyarray
lazyarray is a Python package that provides a lazily-evaluated numerical array class, larray, based on and compatible with NumPy arrays.
LEMS
The Low Entropy Model Specification language: documentation, examples and Schema
MF-GC-network-backprop-public
Code for Cayco-Gajic, Clopath & Silver 2017, "Sparse synaptic connectivity is required for decorrelation and pattern separation in feedforward networks."
morphology_include
Test for https://github.com/NeuroML/NeuroML2/issues/150
NeuroML_API
C++ API for NeuroML 2
pyelectro
Analysis of electrophysiology in Python
pylems
LEMS interpreter implemented in Python
pyNeuroML
A single package in Python unifying scripts and modules for reading, writing, simulating and analysing NeuroML2/LEMS models.
pypet
The new python parameter exploration toolbox. pypet manages exploration of the parameter space and data storage into HDF5 files for you.
pyphi
A Python package for computing integrated information.
pyplane
Phase plane analysis of nonlinear systems
python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
python-stdlib-list
A list of Python Standard Libraries (2.6-7, 3.2-8).
react-redux-tutorial
Tinkering with react/redux
SALib
Sensitivity Analysis Library in Python (Numpy). Contains Sobol, Morris, Fractional Factorial and FAST methods.
SoftwareWG-events
Materials and information related to events/tutorials/workshops that the Software WG undertakes