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COSMIC (sanger-cosmic)

COSMIC

sanger-cosmic

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COSMIC, the Catalogue Of Somatic Mutations In Cancer, is the largest and most comprehensive resource for exploring the impact of somatic mutations in cancer

Location:Wellcome Trust Sanger Institute, Hinxton, UK

Home Page:http://cancer.sanger.ac.uk/

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COSMIC's repositories

VEP_plugins

Plugins for the Ensembl Variant Effect Predictor (VEP) - COSMIC fork

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ensembl-vep

The Variant Effect Predictor predicts the functional effects of genomic variants

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SparkRCor

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ensembl-variation

The Ensembl Variation Perl API and SQL schema

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fpocket

Fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scientific community willing to develop new scoring functions and extract pocket descriptors on a large scale level. fpocket is distributed as free open source software. If you are interested in integrating fpocket in an industrial setting and require official support, please contact Discngine (www.discngine.com).

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hotspot3d

3D hotspot mutation proximity analysis tool

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pdb_residue_types

Extract dictionaries of types of PDB residues from the Chemical Component dictionary

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pdb_interactions

Calculate all atom-atom, residue-residue, and chain-chain interactions in PDB files.

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MstatX

A multiple alignment analyser

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