Sandro Carollo (sandrocarollo)

sandrocarollo

Geek Repo

Location:Innsbruck

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Organizations
icbi-lab

Sandro Carollo's repositories

next-preprocesshisto

A pipeline to preprocess H&E slides in input. The slides will go through a thresholding and edge detection to isolate the tissue before being tessellated into small patches for downstream analysis.

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nextPyrad

Nextflow pipeline to extract features from imaging dataset using Pyradiomics

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scrnaseq

A single-cell RNAseq pipeline for 10X genomics data

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modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

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ML_opt_model

Prediction of relapse patient status from Radiomics features

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