sandipchatterjee

nltk_book_notes

My notes and code from going through the NLTK Book http://www.nltk.org/book/

pfam-get-hmm

To download HMM models from Pfam

23andus

BD2K Hackathon / 23andus project

biome

Python-based web application for metaproteomic analysis of microbiome samples

blazmass_compil

Blazmass proteomic search engine with ComPIL integration for metaproteomics

data-science-ipython-notebooks

Continually updated Data Science Python Notebooks: Spark, Hadoop MapReduce, HDFS, AWS, Kaggle, scikit-learn, matplotlib, pandas, NumPy, SciPy, and various command lines. https://bit.ly/data-notes

deepdive

DeepDive

deepdive_genegene_app

docs

The MongoDB Documentation Project Source.

fasta-get

Pulls protein FASTA files from NCBI RefSeq (complete) and concatenates them into one large FASTA file

fasta-tryp

flask_altair

trying out embedded vega-lite and altair

kaggle_titanic

kaggle titanic dataset

nltk

NLTK Source

Numpy-Tutorial-SciPyConf-2015

SciPy 2015 NumPy tutorial

pandas

Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

pinfo

for displaying photo file information in the browser

sandipchatterjee.github.io

seaborn

Statistical data visualization using matplotlib

simstring

SimString

stacked

visualizing foursquare history

svglib

Read SVG files and convert them to other formats.

twofactorauth

List of sites with two factor auth support which includes SMS, email, phone calls, hardware, and software.