Sandhya Prabhakaran's repositories

BISCUIT_SingleCell_IMM_ICML_2016

R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.

Sparcle_for_spot_reassignments

Code for Sparcle: Spatial reassignment of spots to cells via profile likelihood estimation in transcriptomic images

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Gibbs_IMM_MultivariateGaussian

R code implementing Infinite Mixture Model for multivariate Gaussian. Inference via Gibbs MCMC.

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sandhya212.github.io

Personal Website

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seurat

R toolkit for single cell genomics

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DotPlotPython

How to create dot plots in Python

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GEVisor

Visualization of gene expression data from GeoMx-DSP experiments

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minimalsphinx

A repo with a minimal Sphinx example for Python documentation.

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ml4a-ofx

A collection of openFrameworks apps for working with machine learning

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pzfx_parser

Python package to load and parse tables in a Prism pzfx file.

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sphinx-tutorial

An opinionated tutorial on Sphinx.

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TissueMAPS

Main TissueMAPS repository that bundles different repositories.

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