samueldnj

ms3R

Multi-stock, multi-species, management strategy (ms3) evaluation in R

abft-mse

MSE for Atlantic bluefin

AtlanticBluefinTuna

Testing model based MPs in Atlantic Bluefin Tuna MSE

ClearyHoltCoxRevisions

Revisions of the cleary-holt-cox paper

DBDA_hierach_diagram

init

distribution_diagrams

R-script for generating canonical diagrams of distributions to be used to describe Bayesian hierarchical models.

dotfiles

Repository of dotfiles for R and bash

github-for-developers-7

hierProd

R package containing a hierarchical multi-stock surplus producition assessment model.

hierProdAnalysis

A simulation-estimation model for that compares the performance of hierarchical multispecies and single species surplus production stock assessment models.

iscam-pbs

Fork of jaclyncleary version of iscam-pbs, for integration into mseR-ISCAM

LHrD

R functions for a latin hyper-rectangle experimental design

markdown-latex-boilerplate

Boilerplate for writing a paper with Markdown/Latex and Pandoc

mseR-DCAC

mseR with TBDCAC implementation

nCodClosedLoop

Northern Cod harvest strategy evaluation paper.

pub-graphics

Designing Publication Quality Graphics in R

rpackages

R package development - the Leek group way!

SablefishSR2019

Sablefish science response, 2019

SableIBM

samueldnj.github.io

Academic and personal website of Sam Johnson, hosted by github pages

ThesisProposal

A repository for REM thesis proposal drafts

tmbFuns

Template Model Builder function libraries