renpp's repositories
In-depth-NGS-Data-Analysis-Course
Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.
beast-mcmc
Bayesian Evolutionary Analysis Sampling Trees
Bioinformatics-Training
Bioinformatics training resources
CAFE
Analyze changes in gene family size and provide a statistical foundation for evolutionary inferences.
Intro-to-rnaseq-hpc-O2
This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster
my_python
第一个测试
PacBioFileFormats
Specifications for PacBio® native file formats
PASApipeline
PASA software
quickmerge
A simple and fast metassembler and assembly gap filler designed for long molecule based assemblies.
RNA-seq-analysis
RNAseq analysis notes from Tommy Tang
rnaseq_tutorial
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
scRNA.seq.course
Analysis of single cell RNA-seq data course
smartdenovo
Ultra-fast de novo assembler using long noisy reads
STAR
RNA-seq aligner
wtdbg2
A fuzzy Bruijn graph approach to long noisy reads assembly