salviadr

adtex

Create docker image for adtex tool

awesome-pipeline

A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

BIC-variants_pipeline

BIC@MSKCC Variants Pipeline

bootstrap

The most popular HTML, CSS, and JavaScript framework for developing responsive, mobile first projects on the web.

breast_cancer_panel

Breast Cancer Study

cluster

cluster --*test for git*

CUHK-I2P

Chinese University of Hong Kong, GNBF5010, Introduction to Programming

developments-in-next-generation-sequencing

Developments in next generation sequencing: instruments, read lengths, throughput. See

fks

前端技能汇总 Frontend Knowledge Structure

fork_bar

GenVisR

Genome data visualizations

guidetodatamining

面向程序员的数据挖掘指南

igv.js-flask

Example project for integrating igv.js and flask

IMPACT-Pipeline

Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay

IonNIPT

ThermoFisher Ion Torrent plugin to detect fetal trisomies and estimate fetal fraction

maftools

Summarize, Analyze and Visualize MAF files from TCGA or in house studies.

magenta

Magenta Kernel, Core Drivers, and Services

mutation-signatures

Create mutation signatures from MAF's, and decompose them into Stratton signatures

ngseasy

Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)

pg2dm-python

salviadr.github.io

Personal website

smbl

SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.

SOAPdenovo2

Next generation sequencing reads de novo assembler.

tensorflow

Computation using data flow graphs for scalable machine learning

tensorflow-zh

谷歌全新开源人工智能系统TensorFlow官方文档中文版

test2

WebFrontEndStack

web front end stack: browsers, platforms, libraries, frameworks, tools etc.

wkhtmltopdf

Convert HTML to PDF using Webkit (QtWebKit)

workflows

Community maintained workflows & tools (with examples)