salehahr / graph-extraction-gui

GUI for visualising graph extraction on skeletonised images.

graph-extraction-gui

A GUI to visualise an NN-based graph extraction procedure applied to skeletonised endoscopic images.

Usage

1. Install required packages (s. requirements.txt )
   e.g.

   pip install -r requirements.txt
   

   e.g. or in conda

   conda env create --file requirements.txt
   

2. Run main.py

If using a remote interpreter

First set some variables before running.

• Set the following environment variables (example)

  DISPLAY=localhost:10;LIBGL_ALWAYS_INDIRECT=1
  

• Set the corresponding display number in the GUI viewer (e.g. VcXsrv)

Notes

• Sample skeletonised images are provided in the img folder.
• This GUI implementation is currently not optimised for GPU.