Saile's repositories
Biohackathon_Nepal
Github repo for the tutorial prepared for BioHackathon
bioinformatics-coffee-hour
Short lessons from FAS Informatics coffee hour
clarity_scripts
Additional scripts for integration into Clarity Lims
coyote_cli
command line interface for coyote
Data-Apps
A collection of application which are built on open source technologies/frameworks like R Shiny, Plotly-Dash, Flask.
DGE_workshop_salmon_online
differential gene expression from hbc
free-programming-books
:books: Freely available programming books
git_tutorial
testing git components
hello_github_actions
testing a github actions
ML_medbioinfo
Machine Learning in Medical Bioinformatics
newTechnology
Data analysis from new and old genomic technology
nextflow_rnaseqfus
Fusion genes identification pipeline
pipeline_documentation
This repo generates automatic documentation for pipelines or tools by using a pipeline.yaml file and producing both HTML and MD documents. The MD document can be uploaded to a readthedocs server for online documentation. It uses the mkdocs format, with the required "docs" folder and related files in the project root folder.
raredisease
Call and score variants from WGS/WES of rare disease patients.
sailepradh.github.io
Personal website of Sailendra Pradhananga
skills-hello-github-actions
My clone repository
snakemake-novice-bioinformatics
Introduction to Snakemake for Bioinformatics
test-datasets
Test data to be used for automated testing with the nf-core pipelines
User-Login-System-Tutorial
Learn how to build a basic user login system using Python, Flask, and MongoDB.
workflows-nextflow
Workflow management with Nextflow and nf-core