saijananiganesan

LDAPathwayPrediction

Using LDA to predict pathway elements based on pathways in KEGG

python-ihm

Python package for handling IHM mmCIF and BinaryCIF files

AudioRama

An audio book recommendation engine for Audible users.

heroku_stock_price

A web app to plot stock prices

pdbdev-reports

Flask app for PDB-Dev validation reports

PathwayMapping

Python modules, scripts, and examples for integrative pathway mapping

NLP-with-Python

Scikit-Learn, NLTK, Spacy, Gensim, Textblob and more

CSN2019

Structural dynamics of the human COP9 signalosome revealed by cross-linking mass spectrometry and integrative modeling

Deep-Learning

ML_tutorial

ML tutorial for beginners (data preprocessing and model development)

pmi

Python Modeling Interface

pathway-mapping-tutorial

Tutorial for integrative pathway mapping

imp

The Integrative Modeling Platform

PMI_analysis

imp-sampcon

Scripts to assess sampling convergence and exhaustiveness

nlp_yelp_review_unsupervised

Train unsupervised LDA Topic Model on raw Yelp review text, use topic distributions as feature inputs to supervised classifier of review sentiment

pol_ii_g

Architecture of Pol II(G) and molecular mechanism of transcription regulation by Gdown1

pathway_prediction_test

Tutorials