Saige Docker in google cloud registry
akhilpampana opened this issue · comments
Hello,
I am trying to check if there is a Docker image available for SAIGE in the Google Cloud Registry to run a GWAS analysis in the All Of Us platform. Is the Docker image currently available in GCP, or are there plans to include it in the GCP registry? I would greatly appreciate any information on this matter as it is currently impeding my GWAS efforts. Please let me know if there are any updates regarding this.
Regards
Akhil
You can upload it yourself, which is what we have done. Because of billing concerns, we're keeping a private copy of all of the dockerized tools we use in All of Us.
Thank you so much for the information and clarification.
When I did this last year, All of Us did not yet support the "Artifact Registry", meaning that we had to use Container Registry instead. I had to create a new Google Cloud project because once you've upgraded to Artifact Registry, you cannot go back to the older container registry.
Oh that explains, I believe they have artifact registry thing set now as they enabled Cromwell and wdl to run pipelines which I assume should be done through the google cloud registry.
There are two completely different, incompatible registries that can be used to store container images in google cloud, Container Registry and Artifact Registry: https://cloud.google.com/blog/products/application-development/understanding-artifact-registry-vs-container-registry
Last I was in there, only Container Registry worked for All of Us
OK, I will give it a try and see if the artifact registry works or not, I will keep you posted