sagrudd

nanopoRe

R package including accessory methods for analysis of Nanopore data

epi4you

Some data wrangling for the EPI2ME desktop environment

megrim

amos

A clone of the official AMOS git repo on sourceforge: https://sourceforge.net/projects/amos/

blackmagic

miscellaneous content for NLE projects

fastcat

Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.

fastq-rs

floundeR

a collection of R-based tools for the exploration and analysis of nanopore sequence data

gwangmyeongseong3

This a redux of the Sputnik and OpenSputnik comparative genomics projects

packyak

Code for preparing RPMs from requested R packages

pawchop

Like porechop but implemented in rust - not an official project, yet

pipeline-transcriptome-de

Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads

rampart

Read Assignment, Mapping, and Phylogenetic Analysis in Real Time

rampart_docker

build content for the https://hub.docker.com/r/ontresearch/artic_rampart containers

rtqc

a toy application for real-time QC of DNA sequence data

sagrudd.github.io

symbioinfo

RPM mischief ...

wf-artic

wf-hap-snps

Small variant calling for haploid samples