Douglas Miller's repositories
abfload
matlab fuction for reading abf files including v2.0 files
acq4
Data acquisition for patch clamp ephys / optogenetics / imaging experiments
CaImAn_DendriteAnalysis
Jupyter notebooks for analysis of dendritic two-photon calcium imaging data using the CaImAn toolbox.
doug_learns_rust
A repository where I bumble my way through becoming a rustacean
LJPcalc
Liquid Junction Potential Calculator :zap:
Mask_RCNN
Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow
pyExperimentTracker
A simple custom GUI for tracking electrophysiology and imaging experiments.
pyPipetteCalculator
A calculator for determining brain entry position of a pipette
pyPrairieViewPatch
pyPrairieViewPatch is a python package for interacting with electrophysiology data generated from PrarieView
MIN1PIPE
A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
moco
motion correction
motion_corr_YS
movie preprocessing
pyABF
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
REALS
Robust and Efficient Image Alignment through Simultaneous Low Rank and Sparse Decomposition
site
Public website
trefide
Trend Filter Denoising
VMNetwork
Raw CSV files for PLOS submission