Sagar's repositories
Subtomo-tutorials
Subtomogram averaging workflow tutorials
Minimalistic-Flat-Modern-GUI-Template
A Free to use, Beautiful, Feature Rich, Fully Customizable Flat Modern GUI Template Using Pyside2 designed in Qt Designer, supported for Windows/Linux/Mac OS, Incorporating widgets like Buttons, Progress Bar, Custom Tabs, and many more.
3DCT
This Toolbox is build for 3D correlative microscopy. It helps with 3D to 2D correlation of three dimensional confocal image stacks to two dimensional SEM/FIB dual beam microscope images.
apbs-pdb2pqr
APBS and PDB2PQR software
ASPIRE-Python
Algorithms for Single Particle Reconstruction
eman2
A scientific image processing software suite with a focus on CryoEM and CryoET
STOPGAP
STOPGAP is a MATLAB-based package for subtomogram averaging.
montage
Determining the most efficient tiling strategy for montage cryo-electron tomography
multishot_tomography
documentation for Multishot Tomography
novaCTF
3D-CTF correction for cryo-electron tomography
novaSTA
Subtomogram averaging package based on TOM/AV3
relion
Image-processing software for cryo-electron microscopy
relion-documents
Documentations for RELION
sagarbiophysics.github.io
personal web
SPIDER
SPIDER (System for Processing Image Data from Electron microscopy and Related fields) is an image processing system for electron microscopy, especially usefull for single-particle reconstruction.
STOPGAP-documentation
STOPGAP documentation
TOMOMAN-documentation
TOMOgram MANager Documentation
try-manubot
A repository to practice contributing to a Manubot manuscript
tutorial-template
Template for the Read the Docs tutorial
xmipp
All Xmipp except Core and Visualization