saeid-lab / ANI-ASE

A Simple code for calculating Energy, Frequencies, Thermochemistry and Optimization

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ANI-ASE

A Simple code for calculating Energy, Frequencies, Thermochemistry, and Optimization structure using TorchANI and ASE Interface

Requirements

1.Pytorch:
conda install pytorch torchvision cpuonly -c pytorch
or
pip install torch==1.4.0+cpu torchvision==0.5.0+cpu -f https://download.pytorch.org/whl/torch_stable.html

2.TorhcANI:
pip install torchani

3.ASE:
conda install -c conda-forge ase 

Usage

python3 ANI-SUMMARY.py [Input] [Input_format] [Optimize(0 or 1)]

Input: can be given in any format.
Input_format: Specify input format file: pdb,xyz,gaussian,...
Optimize: o for not opt, 1 for opt

outputs:

  1. output.txt Energies, Frequencies, Thermochemistry can be found in output.txt

2.Trajectory.traj Trajectories during optimization

3.vib.xyz Normal Modes of given system, and can be open using Jmol.

About

A Simple code for calculating Energy, Frequencies, Thermochemistry and Optimization

License:GNU General Public License v3.0


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