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a.her (s-b-r)

s-b-r

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a.her's starred repositories

moby

The Moby Project - a collaborative project for the container ecosystem to assemble container-based systems

Language:GoLicense:Apache-2.0Stargazers:68291Issues:2898Issues:22599

awesome-remote-job

A curated list of awesome remote jobs and resources. Inspired by https://github.com/vinta/awesome-python

Stargazers:28845Issues:1009Issues:53

glances

Glances an Eye on your system. A top/htop alternative for GNU/Linux, BSD, Mac OS and Windows operating systems.

Language:PythonLicense:NOASSERTIONStargazers:25921Issues:500Issues:1870

Gooey

Turn (almost) any Python command line program into a full GUI application with one line

Language:PythonLicense:MITStargazers:20519Issues:281Issues:598

ipython

Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.

Language:PythonLicense:BSD-3-ClauseStargazers:16210Issues:744Issues:7335

c4

C in four functions

Language:CLicense:GPL-2.0Stargazers:9552Issues:328Issues:33

crouton

Chromium OS Universal Chroot Environment

Language:ShellLicense:BSD-3-ClauseStargazers:8533Issues:417Issues:4395

icdiff

improved colored diff

Language:PythonLicense:NOASSERTIONStargazers:4171Issues:62Issues:132

p2pvc

A point to point color terminal video chat.

Language:CLicense:MITStargazers:2893Issues:110Issues:39

common-workflow-language

Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊

Language:Common Workflow LanguageLicense:Apache-2.0Stargazers:1446Issues:111Issues:572

wdl

Workflow Description Language - Specification and Implementations

License:BSD-3-ClauseStargazers:758Issues:89Issues:297

bds-files

Supplementary files for my book, "Bioinformatics Data Skills"

Language:PythonLicense:MITStargazers:594Issues:66Issues:19

lsp

lsp is like ls command but more human-friendly

Language:GoLicense:MITStargazers:522Issues:17Issues:15

x_x

View Excel and CSV files from the command-line.

Language:PythonLicense:Apache-2.0Stargazers:516Issues:12Issues:7

biocode

Bioinformatics code libraries and scripts

Language:PythonLicense:MITStargazers:478Issues:31Issues:59

arvados

An open source platform for managing and analyzing biomedical big data

Language:GoLicense:NOASSERTIONStargazers:370Issues:39Issues:0

ListOfGithubLists

List of github lists

Language:PythonStargazers:368Issues:24Issues:1

mothur

Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immunology at The University of Michigan. This project seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community.

Language:C++License:GPL-3.0Stargazers:261Issues:34Issues:709

zsh-history-analysis

Plot your .zsh_history.

Language:PythonLicense:MITStargazers:223Issues:8Issues:6

nvbio

NVBIO is a library of reusable components designed to accelerate bioinformatics applications using CUDA.

Language:C++License:BSD-3-ClauseStargazers:205Issues:29Issues:36

pecan

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

Language:RLicense:NOASSERTIONStargazers:202Issues:36Issues:1183

python3-presentation

A presentation about Python 3 for APUG

Language:HTMLLicense:MITStargazers:179Issues:9Issues:3

kentUtils

UCSC command line bioinformatic utilities

Language:CStargazers:164Issues:46Issues:0

refinery-platform

The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. The platforms consists of three major components: a data repository with rich metadata capabilities, a workflow engine based on the popular Galaxy system, and visualization tools to support the exploration and interpretation of results at all stages of the analysis process.

Language:PythonLicense:NOASSERTIONStargazers:102Issues:8Issues:2173

pasta

PASTA (Practical Alignment using SATe and Transitivity)

Language:PythonLicense:GPL-3.0Stargazers:84Issues:13Issues:51

genomics

Scripts, utilities and programs for genomic bioinformatics.

Language:PythonLicense:NOASSERTIONStargazers:81Issues:18Issues:53

bioinformatics-compbio-tools

A curated list of useful bioinformatics and computational biology tools, sorted by category.

Stargazers:46Issues:2Issues:0

rfc

Request for comments on interchangeable bioinformatics containers

License:MITStargazers:40Issues:18Issues:170

fbadmin

Python library that uses selenium and phantomjs to automate Facebook Group administration

Language:PythonStargazers:28Issues:8Issues:0

BioSeq.jl

Julia's package for working on Bioinformatics with DNA, RNA and Protein Sequences

Language:JuliaLicense:NOASSERTIONStargazers:27Issues:5Issues:19