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Ryosuke Takeuchi (rysk-t)

rysk-t

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Company:Nagoya Univ.

Location:Japan

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Ryosuke Takeuchi's repositories

allenCCF

Tools to work with Allen Inst CCF data in matlab

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ezROI

interactive interface for making ROI for image segmentation

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matlab-snippets

snippet files for yasnippet in matlab-mode //for Emacs

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MScanLab

Unofficial Matlab codes for ".MDF" data made by MScan and MView (inc. Sutter instruments).

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scanOptim

scripts for optimize scanned book images

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seekRFs

Application for hand mapping of receptive fields of neurons in visual cortex

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visDx

visual stimulus with DxLib

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asovi-core

Python library to control hardwares for neuroscience study

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brainviewer

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Concole_ChangePrimaryDisplay

Windows application for change primary display

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continuous_time_ca_sampler

The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underlying spike in continuous time.

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CRF-Mapro

The sketch for mapping CRF with Processing [http://processing.org]

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emacs-color-themes

A collection of custom and ST2 themes for Emacs. All the themes are named after personal programming and tech heroes.

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gpfa

Gaussian Process Factor Analysis

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matlab-emacs

Major mode for Emacs for editing MATLAB code, and running MATLAB in an inferior shell. (forked on http://sourceforge.net/projects/matlab-emacs/) by Ryosuke Takeuchi 2014-02-07

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nd2

Full-featured nd2 (Nikon NIS Elements) file reader for python. Outputs to numpy, dask, and xarray. Exhaustive metadata extraction

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Neural-Data-Analysis-Tutorials

Here is a repository for Neural Data Analysis Tutorials.

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NoRMCorre

Matlab routines for online non-rigid motion correction of calcium imaging data

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oopsi

up-to-date code for model-based inference of spike trains from calcium imaging

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optinist

calcium imaging pipeline tool

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pmid2APA

Export APA style citation from PMIDs

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pmid2refFormat

matlab-script for making Reference format

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pymoten

Motion energy features from video

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ReadImageJROI

Matlab function to import ROIs from ImageJ

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rimec

functional imaging and extra cellular recording processing codes

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SOLR

Matlab and Python code for sparse ordinal logistic regression (SOLR).

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Suite2P

Tools for processing 2P recordings

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test

test

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TuningCurveFitter

library for major fitting function for neuroscience

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yasnippet

A template system for Emacs

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