Russell Durrett's repositories
primer-design_backups
tools for designing primers
Python_Primers
snp resequencing and cloning primer design scripts
ansible-appsoma-mesos
Complete playbooks to create a Mesos cluster on AWS for Appsoma Welder and associated tools
bees_knees
scripts and tools for parallelized bacterial genome assembly
bioinformatics-hacks
A pile of random hacks.
ea-utils
Automatically exported from code.google.com/p/ea-utils
HypeScript
Python HypeMachine script downloader
fastq-pair
Match up paired end fastq files quickly and efficiently.
Flask-Collect
Collect static files in flask application
gtf-to-genes
Automatically exported from code.google.com/p/gtf-to-genes
HypeMachine-Extension
This is a Google Chrome Extension that injects a download button next to the songs.
overlap_compositions
pipeline to trim adapters, align overlapping reads and calculate per-base compositions
Perl
scripts, modules - whatever I'm currently working on
Registry-Organizer
Biobricks Inventory Query
ruby-hl7
The ruby-hl7 gem
scSNP
variant exploration in single cell data
snake_atac
ATAC and WGS snakemake pipeline
SyntenyImager
Containerized application to capture, process and stream video in real time