Roberto Siani's repositories
AVX_PGC
Script of R.Siani for "Acidovorax pan-genome reveals specific functional traits for plant beneficial and pathogenic plant-associations".
MIT000
CoMet
An opinionated R script for Comparative Metataxonomy
Language:RMIT000
DivNet
diversity estimation under ecological networks
Language:R000
mixed_helper_scripts
A small repo for non-organized, mixed scripts that I use in the lab
OGFilter
A script that parses the OrthoFinder output and keeps only the orthogroups that meet specific criteria
Language:Python000
orthofinder-tools
Tools to process OrthoFinder output: Calculate the most common gene name of an orthogroup by majority vote and create plots analogous to roary_plots
Language:Python000
tramadol_barley_2021
Supplemental scripts and data structures
Language:RMIT000