Renata Retkute's repositories
COVID19Transm
Age-structured model for COVID 19 transmisison
likelhood-functions-idd
Formulating likelihood functions for infectious disease dynamics for neglected tropical diseases
ML_gene_expression
Mathematica notebook to compare methods of ML for ribosom density on mRNA prediction
30DayChartChallenge
Repository containing code for the #30DayChartChallenge.
AMbeRlandTR
Machine learning based lineage tree reconstruction
beadsPlating
Image analysis and simulation of plating with glass beads
BEAT-PD_DREAM_challenge
BEAT-PD DREAM Challenge
ml_cell_lineage_reconstruction
Reconstruction of an in vitro cell lineages
COVID-19_PRSA
Code relating to the PRSA COVID-19 modelling paper
ehr-dream-challenges
Example models to submit to the EHR DREAM Challenges
PestDynamicsAndDispersal
A framework for modelling migratory pest population dynamics and large-scale dispersal
trachomAMIS
A R package implementing Adaptive Multiple Importance Sampling (AMIS) for the inference of trachoma transmission parameters
VLsnthPherModel
Modelling of transmission of zoonotic visceral leishmaniasis and implementation of synthetic pheromone
WNV-forecast-data-2022
Data and forecast submission repository for the 2022 CDC West Nile virus Forecasting Challenge