rpetit3 / dragonflye

:dragon: :fly: Assemble bacterial isolate genomes from Nanopore reads

rpetit3/dragonflye Issues

Polypolish error
Updated 5 months ago2
Coverage of "0"?
Updated 6 months ago2
Feature request: replicon rotation
Updated 8 months ago10
Niche QoL inquiry: polypolish acceptance of nonstandard file affixes?
Closed 9 months ago4
medaka fails to open model file for r1041_e82_400bps_sup_g615
Closed 9 months ago9
flye log
Closed 9 months ago4
mismatch between model names valid for dragonflye 1.1.0 and medaka 1.8.0
Closed a year ago14
Feature request: dragonflye 1.1.N default to flye 2.9.2?
Closed a year ago3
Medaka v1.7.3
Closed a year ago8
Failed to run medaka consensus. - ModelStoreTF exception <class 'NotImplementedError'>
Updated 2 years ago13
mamba installation problem
Closed 2 years ago11
Memory default
Updated 2 years ago4
Memory calculation
Updated 2 years ago2
Problem with conda installing
Updated 2 years ago6
Batch option for Medaka
Closed 2 years ago7
Processing multiple samples
Closed 2 years ago2
Expose nano-hq option
Closed 2 years ago2
Outdated read length after trimming adapters
Closed 2 years ago3
trimming and medaka
Closed 2 years ago7
homologous polishing
Closed 2 years ago3
Unable to verify model 'r941_min_sup_g507'
Closed 3 years ago5
Stuck in kmc part
Closed 3 years ago2
Filtering reads quality
Closed 3 years ago3
Speedup read filtering
Closed 3 years ago5
mm2 CPU count for mapping
Closed 3 years ago2