rossbar

caltech-hpc-user-docs

**Unofficial**, user-contributed documentation for working with Caltech HPC

networkx

Official NetworkX source code repository.

numpy

The fundamental package for scientific computing with Python.

numpy-tutorials

NumPy tutorials & educational content in notebook format

numpydoc

Numpy's Sphinx extensions

nx-guides

Examples and IPython Notebooks about NetworkX

ccf-asct-reporter

HRA ASCT+B Reporter

cellSAM

Codebase for "A Foundation Model for Cell Segmentation"

cwltool

Common Workflow Language reference implementation

deepcell-label

Cloud-based data annotation tools for biological images

deepcell-label-processing

Scripts for processing and converting raw data to label format and creating DCL projects

deepcell-spots

Deep Learning Library for Spot Detection

deepcell-tf

Deep Learning Library for Single Cell Analysis

deepcell-toolbox

Data processing tools associated with deepcell

deepcelltypes-demo-08-2023

hubmap-data-asctb-intersection-analysis

neuromorpho-api

Querying the neuromorpho.org database with Python requests

nx-archive

Archive for public materials such as meetings or presentations

nx-parallel

presentation-bebi205-Spring2023

NumPy for biological imaging

pygraphviz

Python interface to Graphviz graph drawing package

pytorch-examples

A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.

pytorch3d

PyTorch3D is FAIR's library of reusable components for deep learning with 3D data

resume

Resume/CV for Ross Barnowski

scientific-python-lectures

Tutorial material on the scientific Python ecosystem

scikit-image

Image processing in Python

scipy

Scipy library main repository

segment_anything_sandbox

sphinx-gallery

Sphinx extension for automatic generation of an example gallery

zarr-python

An implementation of chunked, compressed, N-dimensional arrays for Python.