Roman Luštrik (romunov)

romunov

Geek Repo

Company:@genialis

Location:Ljubljana, Slovenia

Home Page:https://biolitika.si

Twitter:@romunov

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Roman Luštrik's repositories

AED

Package accompanying 2009 book by Zuur et. al. (Mixed Effects Models and Extensions in Ecology with R)

peep

Fit your oversized data.frame to your console width.

slovenia_death_data

Monthly and daily death data for Slovenia.

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romunov.github.io

My personal website.

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rladies-git-demo

A repository for demonstrational purposes only.

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adegenet

adegenet: a R package for the multivariate analysis of genetic markers

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compression-puzzle

Attempts to crack the "compression puzzle".

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data

Collecting and organising data as they come in from various sources - master tables are at https://tinyurl.com/sledilnik-gdocs

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data.table

R's data.table package extends data.frame:

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emt_dynamics

Scripts used for "Comparing transcriptional dynamics of the epithelial-mesenchymal transition"

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estimate-prevalence

Simulate simple populations and find interesting patterns in estimating prevalence.

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googleAuthR

Google API Client Library for R. Easy authentication and help to build Google API R libraries with OAuth2. Shiny compatible.

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Inat_Images

Script to download images from inaturalist.org

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ljubljana_street_names

Investigate Ljubljana's street names history.

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MULTI-seq

R implementation of MULTI-seq sample classification workflow

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place_mnz

Porazdelitev plač z MNZ

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podcasti.si

https://podcasti.si

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psupertime

psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels

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resamplediversity

An accompanying package for a Heredity paper

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resolwe

Open source dataflow engine in Django

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resolwe-bio

Bioinformatics pipelines for Resolwe

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resolwe-bio-py

Resolwe Bioinformatics Python API

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resolwe-docker-images

Docker images for resolwe and resolwe-bio

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RLadies_reproducible

This repository served for a workshop on the 20ht December 2023.

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SCRbayes

SCR code for JWM paper

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SEIR_COVID19

SEIR model for COVID-19 infection, including different clinical trajectories of infection

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si_podcasts_history

A script for scraping podcasti.si website and showing top podcasts and their published episodes.

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