rodtheo's repositories
nf-core-genomeeval
A comprehensive assembly evaluating pipeline
rs-genomesub
A rust command line toolkit for making a genome assembly ready to submit
bioinformatics-fundaments-in-rusts
A generic repo where
BWTIL
BWT Text Indexing Library: a set of tools to work with BWT-based text indexes
genomicR_2018
Course materials for my course "Genomic with R" that ran in 2018. The material focused mainly on data manipulation and visualization.
genomicR_2019
Course materials for my course "Genomic with R" that ran in 2019. The material focused mainly on data manipulation and visualization.
gff-toolbox
Gff-toolbox is a toolbox of commands that enables one to get the gist of their GFF annotation files, as well as to analyse them in different ways.
htsget-mvp
MVP of the HtsGet spec https://samtools.github.io/hts-specs/htsget.html
miniprot-rs
Miniprot Rust Bindings
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
nf-core-clrpolish
Nf-core pipeline to polish long-read assemblies originated from pacbio clr reads (mainly from pacbio sequel platforms)
NLP_Render_App
Generic Template for Fastai NLP Model in Render
projeto-fastai-cis-2019
Repositório com os arquivos e documentos referentes ao projeto Detecção de conteúdo depressivo em tweets.
rMq
Implementations of range Maximum query algorithms in C++.
rtrvar22
Solutions for the LBB-Mendelics Bioinformatic 2021 Challenge
rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
snakemake_pipelines
Collection of often used pipelines based on snakemake.